CDEK

About CDEK

CDEK is a fixture-data instance used for end-to-end testing.

About CRIB

CRIB fixture content for end-to-end testing.

Team

About the Kinch Center in

Kinch Center fixture content for end-to-end testing.

Tyler Schwartz in

Tyler is a software developer with a background in web and database development. He is a Computer Science graduate of Michigan Technological University (Houghton, Mich.). His interests include the gathering and presentation of large datasets and GIS.

He is the lead database & application developer for the Center for Research Innovation and Biotechnology at the Purdue University College of Pharmacy, and current architect of the CDEK platform. Outside work, Tyler enjoys gardening, hiking, and community service.

Zachary Kraft in

Zachary is a web application developer with a background in full-stack web applications and experimental web architectures. He has years of experience working on cutting-edge web platforms and solving complex programming demands. His main interests are working with open-source web technologies.

He is the frontend developer for the Center for Research Innovation and Biotechnology at the Purdue University College of Pharmacy, on the CDEK platform. In his free time he tinkers with research papers, 3D printing, and archery.

Data provenance

CDEK is primarily comprised of trial data from the AACT database, along with data sourced from various other databases including DrugBank, ChEMBL, PubChem, Drugs@FDA, EMA.

Inclusion criteria from each data source are as follows:

  • AACT: all interventions associated with any trial of type Biological, Combination Product, Dietary Supplement, Drug, or Genetic.
  • DrugBank: any compound that isn't labeled as experimental from the “All” drug-group release v5.0.7.
  • ChEMBL: any compound with a max_phase greater than 0 from ChEMBLdb release v23.
  • PubChem: any compound annotated as having ClinicalTrials.gov as a source as of 2018-05-15.
  • Drugs@FDA: any approved compound listed in the database as of 2020-01-01.
  • EMA: any compound listed in the European public assessment reports as of 2018-04-24.
Note: we periodically ingest new data from the sources above so CDEK stays current with the latest available API data.

Download database export

Portions of the CDEK database have been exported for public consumption, and are available through a PostgreSQL data dump file.

This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.

Contact or report an issue

To contact us, please email crib.cdek@gmail.com, or if you would like to report an error in the data please use this form.

This rebuild is maintained by Data4ThePeople.